Time | Location | |
Lecture | Friday 10 - 12 | Arnimallee 6 SR 025/026 |
Exercise | Friday 12 - 14 | Arnimallee 6 SR 025/026 |
Seminar | Monday 10 - 12 | Takustr. 9 SR 051 |
Date | Lecturer | Topic | Lecture Material | Aditional Material |
---|---|---|---|---|
14 April 2014 | Bockmayr | Introduction to systems biology | Slides | Article |
18 April 2014 | Holiday | |||
21 April 2014 | Holiday | |||
25 April 2014 | Bockmayr Bockmayr |
Continuous modeling: reaction networks, phase plane analysis |
Slides XPP Software |
Lecture Notes E. Sontag (Chapt. 1.6, 1.4) |
28 April 2014 | Bockmayr | Continuous modeling: stability analysis | Slides | Lecture Notes E. Sontag (Chapt. 1.2) |
02 May 2014 | Bockmayr Röhl |
Continuous modeling: stability analysis Exercises |
Exercises | |
05 May 2014 | Bockmayr | Continuous modeling: bifurcation analysis | Slides | Lecture Notes E. Sontag (Chapt. 1.9) |
09 May 2014 | Bockmayr Röhl |
Discrete modeling: Thomas formalism Exercises: Bifurcation analysis |
Slides Exercises |
Online book |
12 May 2014 | Forgo Misircova |
Continuous modeling: Seminar | Paper1 Paper2 Cell Cycle Page |
|
16 May 2014 | Bockmayr Bockmayr |
Discrete modeling: Thomas formalism Discrete vs. continuous descriptions |
Slides | Article |
19 May 2014 | Röhl | Exercises | Exercises | GinSim |
23 May 2014 | Bockmayr Bockmayr |
Discrete modeling: Model checking | Slides | |
26 May 2014 | Röhl | Exercises | Exercises | |
30 May 2014 | Bockmayr Röhl |
Constraint-based modeling Exercises |
Slides | |
02 June 2014 | Koch Marschall |
Discrete modeling: Seminar | Paper1 Paper2 Software |
|
06 June 2014 | Bockmayr Röhl |
Constraint-based modeling Exercises |
Slides Exercise |
|
09 June 2014 | Holiday | |||
13 June 2014 | Bockmayr Bockmayr |
Stochastic modeling | Slides1 Slides2 |
Article Online Lecture |
16 June 2014 | No lecture | |||
20 June 2014 | Frisch Vimalakanthan |
Constraint-based modeling: Seminar | Paper1 Paper2 Software |
|
20 June 2014 | Faizi Güttler |
Stochastic modeling: Seminar | Paper1 Paper2 Software |
|
14 July 2014 | Bockmayr Röhl |
Fragestunde zur Prüfungsvorbereitung | ||
18 July 2014 | Bockmayr Vingron |
Mündliche Prüfungen |