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Kontaktadresse:

Prof. Alexander Bockmayr

Ling Sun

Meeting time: date (dd.mm.yyyy); time, eg. 10 - 14, means we will start at 10:15.

Classroom: by default, we will meet in the computer room in Arnimallee 6, 017 / A6 (otherwise, it will be informed).
  • Week - 13:
    • final presentation: Tuesday, 30.05.2017, 10 - 12, room SR 108/109 A6.

  • Week - 12:
    • 13th meeting: Wednesday, 24.05.2017, 12 - 16, room SR 108/109 A6.

  • Week - 11:
    • 12th meeting: Tuesday, 09.05.2017, 12 - 16.

  • Week - 9:
    • 11th meeting: Tuesday, 25.04.2017, 10 - 14.

  • Week - 8:
    • 10th meeting: Thursday, 20.04.2017, 10 - 14.

  • Week - 7:
    • 9th meeting: Monday, 11.04.2017, 10 - 14.

  • Week - 6:
    • 8th meeting: Friday, 07.04.2017, 10 - 13, Room SR 108/109 / A6.
    • 7th meeting: Monday, 04.04.2017, 10 - 14, Room 009 / A6.

  • Week - 5:
    • 6th meeting: Monday, 27.03.2017, 10 - 14.
      • Programming tasks: Algorithms 1 ~ 4.

  • Week - 4:
    • 5th meeting: Monday, 20.03.2017, 10 - 14.
      • Slides: RE_part_2.pdf
      • Exercise: programming tasks on RE algorithms.



All documents.

  • RE_part_1.pdf: Theories for the reverse engineering algorithm, part 1.

Topic attachments
I Attachment Action Size Date Who Comment
Analysis_GRN_Project_introduction.pdfpdf Analysis_GRN_Project_introduction.pdf manage 1317.6 K 26 Jan 2017 - 20:19 LingSun Introduction of the software project "Analysis of gene regulatory networks".
Exercise_2017_02_28.pdfpdf Exercise_2017_02_28.pdf manage 236.3 K 28 Feb 2017 - 17:27 LingSun Exercise for creating the ASTG from a given model.
Exercise_2017_02_28.pdfrevInfo=1pdfrevInfo=1 Exercise_2017_02_28.pdfrevInfo=1 manage 0.1 K 01 Jan 1970 - 00:00 UnknownUser  
Exercise_2017_02_28_sample.pdfpdf Exercise_2017_02_28_sample.pdf manage 192.2 K 28 Feb 2017 - 17:27 LingSun An example on creating the ASTG from a given model.
RE_part_1.pdfpdf RE_part_1.pdf manage 406.3 K 15 Mar 2017 - 10:16 LingSun Theories for the reverse engineering algorithm, part 1.
RE_part_2.pdfpdf RE_part_2.pdf manage 471.8 K 20 Mar 2017 - 16:07 LingSun Theories for the reverse engineering algorithm Algo-4, part 2.
Softwarepraktikum_Einfuehrung_Regulatorische_Netzwerke.pdfpdf Softwarepraktikum_Einfuehrung_Regulatorische_Netzwerke.pdf manage 233.3 K 28 Feb 2017 - 09:40 LingSun Slides of basics on discrete modelling of gene regulatory networks.
basics_discrete_modelling.pdfpdf basics_discrete_modelling.pdf manage 1037.0 K 06 Mar 2017 - 11:01 LingSun Basic discrete modelling and row properties of the ASTG.
exercises_model_cond_ASTG_row.pdfpdf exercises_model_cond_ASTG_row.pdf manage 480.8 K 06 Mar 2017 - 17:09 LingSun Exercises on: model conditions, row properties in ASTGs, and a programming task.
programming_tasks_w3w4.pdfpdf programming_tasks_w3w4.pdf manage 40.0 K 15 Mar 2017 - 11:28 LingSun Some programming tasks in week 3, 4, 5.
Topic revision: r28 - 24 May 2017, LingSun
 
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