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RNAAligner in ABI
Area Computational RNA analysis Topic Extending structural RNA alignment algorithm to find regulatory motifs in mRNAs The project builds on work on structural…
RNA_Bioinformatics in ABI
RNA Bioinformatics (S) (19401111), SoSe 2016 Welcome to the Wiki of the seminar RNA Bioinformatics. PLEASE NOTE THAT WE WILL USE THE NEW KVV SYSTEM. CLICK HERE to…
Raw_results in ABI
Page Raw_results Raw results of benchmark Dataset I Runs completed: Error Rate 5 10 Sample 0.1 1 0.1 1 RazerS done done done …
Razers2Revision in ABI
Page Razers2Revision General Points TODO: Wait for evaluation of Hobbes on human, execute class, update tables. Manuel : Section S5 was updated to reflect the u…
ReadLengthSplicing in ABI
Mich hat es interessiert zu wissen wie viele exons wir tatsächlich verlieren, wenn wir nicht auf die spliced reads achten würden. Bzw wie sich diese verteilung än…
ReadMapper in ABI
Devising read mapping strategies in KNIME Area Read mapping quality, Mappability, KNIME Topic The main goal of this thesis is to devise strategies to compute a)...
ReadMappingBWT in ABI
Read mapping Vorlesungen Date Lecture* *Materials 21.11.2011 Read mapping overview and the BWT Read mapping survey, Read mapping benchmark 23.11…
Reads in ABI
reads.fastq This page contains the read.fastq file
ReinertAppointment in ABI
OUTDATED! Go to: http://www.mi.fu berlin.de/en/inf/groups/abi/teaching/office hours/ if (window.location.search ==
ReinertConsult in ABI
Main.AnjaKasseckert 28 Feb 2022
RepeatMasking in ABI
Repeat Masking Repeats in DNA Sequenzen sind ein häufig beobachtetes Phänomen. Insbesondere in den ersten Schritten der Genome Analyse verursachen sie Probleme, d…
ResearchCooperations in ABI
Research Cooperations The Reinert group at FU Berlin maintains research cooperations with German and international research groups. Note that this list here is no…
ResearchLogAlessandroMammana in ABI
Page ResearchLogAlessandroMammana ((short description what this page is about)) Section 1 ((content)) Section 2 ((content)) Comments
ResearchLogOliverStolpe in ABI
ResearchLogOliverStolpe ((short description what this page is about)) Section 1 ((content)) Section 2 ((content)) Comments
ResearchLogReneMaerker in ABI
Algorithm Engineering for High Throughput Sequencing Data Summary During the last five years modern sequencing technologies have brought a super exponential grow…
ResearchLogTemesgenDadi in ABI
Metagenomics. Background Metagenomics is the study of genetic material (metagenome) recovered directly from environmental samples. In these environmental samples…
ResearchLogTemesgenDadi18032014 in ABI
Meeting/Consultation minute 18 03 2014 Discussed Topics: * Genovo: Genovo is written in C . * Other metagenomic assemblers: Metavelvet, an extension of…
ResearchLogXintianYOU in ABI
ResearchLogXintianYOU Developing tools for high throughput sequencing technology Section 1 ((content)) Section 2 ((content)) Comments
ResearchLogs in ABI
Research Logs * Genome Comparison (Birte Kehr, Manuel Holtgrewe) * Precursor Selection (Alexandra Zerck) * Indices and Applications (David Weese) * BW…
RnaAnalysis in ABI
RNA analysis Vorlesungen Date Lecture* *Materials 11.1.2012 RNA folding rna.pdf 16.1.2012 RNA alignment rna2.pdf Übungen Content Ex…
RnaSeqMSplazers in ABI
PISB SeqAn Projekt RNA Seq: Mapping von RNA reads mit MSplazer Hintergrund: Mapping von RNA reads Im Gegensatz zum Whole Genome Sequencing, wo ein kompletter…
RnaSeqP4 in ABI
Page RnaSeqP4 This is the project page of the RNA Seq group. Students Mail an alle Gruppenmitglieder: AA2010SS RNASeq bei lists.spline.de Name email Cori…
RnaSeqReadSimulator in ABI
PISB SeqAn RNA Seq Read Simulator Hintergrund: RNA Seq Simulation Simulierte Daten leisten wichtige Dienste bei der Entwicklung, Fehlersuche und Bewertung von …
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