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AdvancedAlgorithms11_Indices
in ABI
Index Data Structures Lectures Date Lecture* *Materials (Enhanced) Suffix Array 09.05.2011 Suffix Array Construction and Searching script 07…
AdvancedAlgorithms12
in ABI
Page AdvancedAlgorithms12 Welcome to the Wiki of the Lecture Advanced Algorithms in Bioinformatics (P4). News * (18.1.13) The results of the second exam can…
DfgWorkPackages
in ABI
Page DfgWorkPackages This is the list of work packages from the DFG project. Design and verification of a suitable model for cross species genome compari son (...
JournalClubSS13
in ABI
Page JournalClubSS13 Welcome to the Wiki of the Journal Club In this seminar we will present original work in Computational biology as well as progress reports fr…
LastImplementation
in ABI
Implementation of LAST with gapped seeds and applications to read mapping and local alignment Area Substring Indices, read mapping, local alignment Topic The go…
ParallelSuffixArray
in ABI
Parallel Suffix Array Construction Area Substring Indices Topic Das Suffix Array speichert die Anfänge aller Suffixe eines (oder mehrerer) Texte in lexikographi…
RnaSeqP4
in ABI
Page RnaSeqP4 This is the project page of the RNA Seq group. Students Mail an alle Gruppenmitglieder: AA2010SS RNASeq bei lists.spline.de Name email Cori…
SeedingStrategies
in ABI
Implementation and evaluation of index based seeding strategies in SeqAn Area Substring Indices, read mapping, local alignment, q mer indices Topic The goal of …
Sequence_analysi_2013
in ABI
Sequence Analysis SS 2013 Welcome to the Wiki of the Lecture Sequence Analysis. This module consists of 2 hours lecture, 2 hours exercise and 2 hours seminar. The…
Sequence_analysis_2013
in ABI
THIS IS STILL OLD Times and rooms Rooms and timings Event Day Time Address Room Lecture Tue 10 12 Takustr. 9 005 Lecture Thu …
Sequence_analysis_2014
in ABI
Sequence Analysis, SoSe 2014 (LV Nr. 19716, 19716a, 19716b) Welcome to the Wiki of Sequence Analysis. This module consists of 2 hours lecture, 2 hours exercis…
Sequence_analysis_2015
in ABI
Sequence Analysis, SoSe 2015 (LV Nr. 19401601 (V), 19401602 (Ü), 19401611 (S)) Welcome to the Wiki of Sequence Analysis. This module consists of 2 hours lectu…
Sequence_analysis_2016
in ABI
Sequence Analysis, SoSe 2016 *(LV Nr. 19401601 (V), 19401602 (Ü), 19401611 (S)) Welcome to the Wiki of Sequence Analysis. Dear Students. We will use for the lec…
SpaceEfficientBWTConstruction
in ABI
SpaceEfficientBWTConstruction Implementation of a fast and memory efficient BWT construction algorithm. Background The Burrows Wheehler Transform transforms a te…
ThesesHome
in ABI
Theses Page OUTDATED! Go to: https://kvv.imp.fu berlin.de/x/8RK4cp Available topics * If you are interested in doing your thesis in algorithmic bioinformatic…
WeeklyReportDFG
in ABI
Weekly Report for the DFG project: Algorithm Engineering for High Throughput Sequencing Data Summarizes the weekly progress of the DFG project. Jul 2011 * 01….
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