Lectures
| Date | Lecture | Materials |
|---|---|---|
| 16.12.2010 | Branch-and-Cut Intro | b-and-c.pdf, Webpage http://www2.iwr.uni-heidelberg.de/groups/comopt/software/PORTA |
| 4.1.2011 | Branch-and-Cut for sequence alignment (modelling) | Algorithms_2008_LanciaMathematical_Programming_in_Computational_Biology.pdf |
| 6.1.2011 | Branch-and-Cut for sequence alignment (algorithms I) | |
| 11.1.2011 | Branch-and-Cut for sequence alignment (algorithms II) | |
| 13.1.2011 | Langrage relaxation | lagrange.pdf AdditionalMaterial |
| 18.1.2011 | Lagrange relaxation for RNA alignment | multipleStructuralRNAalignment.pdf |
Exercises
| Content | Exercise | Material |
Deadline |
|---|---|---|---|
| Problem sheet | exercise 10 | Exercises 10 | 21.01.11 |
| Problem sheet | exercise 8 | Exercises 8 | 7.01.11 |
| Problem sheet | exercise 9 | Exercises 9 | 14.01.11 |
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