The read mapping tool RazerS should be adapted to perform local alignment verification like BLAST. Furthermore the input parameters and the output format of BLAST should be incorporated into RazerS.
Using the suffix array implementation available in SeqAn, the goal is to design, develop and experimentally verify an algorithm in SeqAn that finds all maximal complemented RNA palindromes of significant length in a given RNA sequence.
Wikis: ABI-Wiki | Orga-Wiki
Räume: Belegplan | Reservierg.
Finanzen SAP: oRA